############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ternarynet ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’ * installing *source* package ‘ternarynet’ ... ** using staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c array.c -o array.o clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gn.c -o gn.o clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gn_Rwrap.c -o gn_Rwrap.o clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tnetfit.cc -o tnetfit.o tnetfit.cc:73:39: warning: unused variable 'tempi' [-Wunused-variable] int nOutcomes=3, l0, stage_count, tempi, jtrans, nTransition; ^ 1 warning generated. clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tnetfuncs.cc -o tnetfuncs.o tnetfuncs.cc:427:5: warning: unused variable 'tableWidth' [-Wunused-variable] int tableWidth = powi(nOutcomes,maxDegree); ^ tnetfuncs.cc:435:5: warning: unused variable 'ipause' [-Wunused-variable] int ipause; ^ tnetfuncs.cc:517:6: warning: unused variable 'ipause' [-Wunused-variable] int ipause; ^ tnetfuncs.cc:521:16: warning: unused variable 'i' [-Wunused-variable] int m1, m2, i; ^ 4 warnings generated. clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tnetpost.cc -o tnetpost.o tnetpost.cc:25:9: warning: unused variable 'ipause' [-Wunused-variable] int ipause; ^ tnetpost.cc:27:9: warning: unused variable 'm0fit' [-Wunused-variable] int m0fit; ^ tnetpost.cc:28:42: warning: unused variable 'finalScore' [-Wunused-variable] double newScore, oldScore, minScore, finalScore; ^ tnetpost.cc:30:9: warning: unused variable 'l0' [-Wunused-variable] int l0, stage_count, tempi, jtrans, nTransition; ^ tnetpost.cc:30:13: warning: unused variable 'stage_count' [-Wunused-variable] int l0, stage_count, tempi, jtrans, nTransition; ^ tnetpost.cc:30:26: warning: unused variable 'tempi' [-Wunused-variable] int l0, stage_count, tempi, jtrans, nTransition; ^ tnetpost.cc:30:33: warning: unused variable 'jtrans' [-Wunused-variable] int l0, stage_count, tempi, jtrans, nTransition; ^ tnetpost.cc:30:41: warning: unused variable 'nTransition' [-Wunused-variable] int l0, stage_count, tempi, jtrans, nTransition; ^ 8 warnings generated. clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c util.c -o util.o clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ternarynet.so array.o gn.o gn_Rwrap.o init.o tnetfit.o tnetfuncs.o tnetpost.o util.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.1/Resources/library/00LOCK-ternarynet/00new/ternarynet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ternarynet)