############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf structToolbox.buildbin-libdir && mkdir structToolbox.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=structToolbox.buildbin-libdir structToolbox_1.6.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'structToolbox' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'structToolbox' finding HTML links ... done ANOVA html AUC html DFA html DatasetExperiment_boxplot html DatasetExperiment_dist html DatasetExperiment_factor_boxplot html DatasetExperiment_heatmap html HCA html HSD html HSDEM html MTBLS79_DatasetExperiment html PCA html PLSDA html PLSR html SVM html as_data_frame html autoscale html balanced_accuracy html blank_filter html blank_filter_hist html bootstrap html calculate html chart_plot html classical_lsq html compare_dist html confounders_clsq html confounders_lsq_barchart html confounders_lsq_boxplot html constant_sum_norm html corr_coef html dfa_scores_plot html dratio_filter html feature_boxplot html feature_profile html feature_profile_array html filter_by_name html filter_na_count html filter_smeta html fisher_exact html fold_change html fold_change_int html fold_change_plot html forward_selection_by_rank html fs_line html glog_opt_plot html glog_transform html grid_search_1d html gs_line html hca_dendrogram html kfold_xval html kfoldxcv_grid html kfoldxcv_metric html knn_impute html kw_p_hist html kw_rank_sum html linear_model html log_transform html mean_centre html mean_of_medians html mixed_effect html model_apply html model_predict html model_reverse html model_train html mv_boxplot html mv_feature_filter html mv_feature_filter_hist html mv_histogram html mv_sample_filter html mv_sample_filter_hist html nroot_transform html ontology_cache html pairs_filter html pareto_scale html pca_biplot html pca_correlation_plot html pca_dstat_plot html pca_loadings_plot html pca_scores_plot html pca_scree_plot html permutation_test html permutation_test_plot html permute_sample_order html plsda_predicted_plot html plsda_regcoeff_plot html plsda_roc_plot html plsda_scores_plot html plsda_vip_plot html plsda_vip_summary_plot html plsr_cook_dist html plsr_prediction_plot html plsr_qq_plot html plsr_residual_hist html pqn_norm html pqn_norm_hist html prop_na html r_squared html rsd_filter html rsd_filter_hist html run html sb_corr html split_data html stratified_split html structToolbox html svm_plot_2d html tSNE html tSNE_scatter html tic_chart html ttest html vec_norm html wilcox_p_hist html wilcox_test html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'structToolbox' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'structToolbox' as structToolbox_1.6.1.zip * DONE (structToolbox)