############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/slingshot_2.2.1.tar.gz && rm -rf slingshot.buildbin-libdir && mkdir slingshot.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=slingshot.buildbin-libdir slingshot_2.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL slingshot_2.2.1.zip && rm slingshot_2.2.1.tar.gz slingshot_2.2.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 47 500k 47 239k 0 0 626k 0 --:--:-- --:--:-- --:--:-- 625k 100 500k 100 500k 0 0 779k 0 --:--:-- --:--:-- --:--:-- 780k install for i386 * installing *source* package 'slingshot' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for 'slingshot' with signature 'data="ClusterExperiment"': no definition for class "ClusterExperiment" ** help *** installing help indices converting help for package 'slingshot' finding HTML links ... done SlingshotDataSet-class html finding level-2 HTML links ... done SlingshotDataSet html as.PseudotimeOrdering html as.SlingshotDataSet html embedCurves html getCurves html getLineages html newSlingshotDataSet html pairs-SlingshotDataSet html plot-SlingshotDataSet html plot3d-SlingshotDataSet html predict.SlingshotDataSet html slingBranchGraph html slingBranchID html slingClusterLabels html slingCurves html slingLineages html slingMST html slingParams html slingPseudotime html slingReducedDim html slingshot html slingshotExample html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'slingshot' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'slingshot' as slingshot_2.2.1.zip * DONE (slingshot) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'slingshot' successfully unpacked and MD5 sums checked