############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf sigsquared.buildbin-libdir && mkdir sigsquared.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sigsquared.buildbin-libdir sigsquared_1.26.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'sigsquared' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for 'ensembleCostFcn' with signature 'dataSet="ExpressionSet",geneSig="geneSignature",jpdf="solnSpace"': no definition for class "solnSpace" in method for 'getCVCuts' with signature 'cutoffResults="solnSpace"': no definition for class "solnSpace" in method for 'summarizeCVCuts' with signature 'cutoffResults="solnSpace"': no definition for class "solnSpace" ** help *** installing help indices converting help for package 'sigsquared' finding HTML links ... done BrCa443 html analysisPipeline html ensembleAdjustable html geneSignature-class html setGeneSignature html sigsquared html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'sigsquared' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'sigsquared' as sigsquared_1.26.0.zip * DONE (sigsquared)