############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/seq2pathway_1.26.0.tar.gz && rm -rf seq2pathway.buildbin-libdir && mkdir seq2pathway.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seq2pathway.buildbin-libdir seq2pathway_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL seq2pathway_1.26.0.zip && rm seq2pathway_1.26.0.tar.gz seq2pathway_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 816k 100 816k 0 0 868k 0 --:--:-- --:--:-- --:--:-- 868k 100 816k 100 816k 0 0 868k 0 --:--:-- --:--:-- --:--:-- 868k install for i386 * installing *source* package 'seq2pathway' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway' ** help *** installing help indices converting help for package 'seq2pathway' finding HTML links ... done Chipseq_Peak_demo html FisherTest_GO_BP_MF_CC html FisherTest_MsigDB html GRanges_demo html addDescription html dat_RNA html dat_chip html gene2pathway_test html plotTop10 html runseq2gene html runseq2pathway html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway' ** testing if installed package can be loaded from final location Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'seq2pathway' ... ** testing if installed package can be loaded Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway' * MD5 sums packaged installation of 'seq2pathway' as seq2pathway_1.26.0.zip * DONE (seq2pathway) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'seq2pathway' successfully unpacked and MD5 sums checked