############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ribosomeProfilingQC_1.6.1.tar.gz && rm -rf ribosomeProfilingQC.buildbin-libdir && mkdir ribosomeProfilingQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ribosomeProfilingQC.buildbin-libdir ribosomeProfilingQC_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ribosomeProfilingQC_1.6.1.zip && rm ribosomeProfilingQC_1.6.1.tar.gz ribosomeProfilingQC_1.6.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 41 2114k 41 885k 0 0 883k 0 0:00:02 0:00:01 0:00:01 883k 100 2114k 100 2114k 0 0 1239k 0 0:00:01 0:00:01 --:--:-- 1240k install for i386 * installing *source* package 'ribosomeProfilingQC' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ribosomeProfilingQC' finding HTML links ... done FLOSS html PAmotif html assignReadingFrame html codonUsage html countReads html coverageDepth html coverageRates html cvgd-class html estimatePsite html filterCDS html frameCounts html getFPKM html getORFscore html getPsiteCoordinates html ggBar html metaPlot html normByRUVs html plotDistance2Codon html plotFrameDensity html plotSpliceEvent html plotTE html plotTranscript html prepareCDS html readsDistribution html readsEndPlot html readsLenToKeep html ribosomeReleaseScore html shiftReadsByFrame html simulateRPF html spliceEvent html strandPlot html summaryReadsLength html translationalEfficiency html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ribosomeProfilingQC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ribosomeProfilingQC' as ribosomeProfilingQC_1.6.1.zip * DONE (ribosomeProfilingQC) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'ribosomeProfilingQC' successfully unpacked and MD5 sums checked