############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/restfulSE_1.16.0.tar.gz && rm -rf restfulSE.buildbin-libdir && mkdir restfulSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=restfulSE.buildbin-libdir restfulSE_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL restfulSE_1.16.0.zip && rm restfulSE_1.16.0.tar.gz restfulSE_1.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 253k 100 253k 0 0 385k 0 --:--:-- --:--:-- --:--:-- 386k install for i386 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'restfulSE/vignettes/restfulSE.Rmd' to 'restfulSE/README.md' * installing *source* package 'restfulSE' ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'restfulSE' finding HTML links ... done BQ3_Array-class html BQ3_Array html BQ3_ArraySeed-class html BQ3_Matrix-class html BQ3_Source-class html BQ3_Source html BQM_Array-class html BQM_Array html BQM_ArraySeed-class html BQM_Matrix-class html BQM_Source-class html BQM_Source html BQSummarizedExperiment html DelayedArray-BQ3_ArraySeed-method html RESTfulSummarizedExperiment-class html RESTfulSummarizedExperiment html assay-BQSummarizedExperiment-missing-method html assayNames-BQSummarizedExperiment-method html basic_clinvars html bqConn html cgcConn html dim-BQ3_ArraySeed-method html dim-BQM_ArraySeed-method html dim-RESTfulSummarizedExperiment-method html dimnames-BQ3_ArraySeed-method html dimnames-BQM_ArraySeed-method html goPatt html gtexTiss html isbCgcDatasets html isbCgcTables html newDA html pancan_SE html se1.3M html seByTumor html seByTumor_2016 html tasicCortex html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'restfulSE/vignettes/restfulSE.Rmd' to 'restfulSE/README.md' * installing *source* package 'restfulSE' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'restfulSE' as restfulSE_1.16.0.zip * DONE (restfulSE) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'restfulSE' successfully unpacked and MD5 sums checked