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This page was generated on 2022-04-13 12:08:36 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for rama on machv2


To the developers/maintainers of the rama package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rama.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 1522/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rama 1.68.0  (landing page)
Raphael Gottardo
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/rama
git_branch: RELEASE_3_14
git_last_commit: ec6ec60
git_last_commit_date: 2021-10-26 11:46:37 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: rama
Version: 1.68.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL rama
StartedAt: 2022-04-12 03:13:22 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 03:13:33 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 11.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL rama
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’
* installing *source* package ‘rama’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c estimation_slice.c -o estimation_slice.o
estimation_slice.c:115:25: warning: unused variable 'dens_epsilon_new' [-Wunused-variable]
  double dens_epsilon=0,dens_epsilon_new=0;
                        ^
estimation_slice.c:121:10: warning: unused variable 'SSeps_sd' [-Wunused-variable]
  double SSeps_sd=0.;
         ^
estimation_slice.c:116:10: warning: unused variable 'SSR1' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
         ^
estimation_slice.c:116:17: warning: unused variable 'SSR2' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
                ^
estimation_slice.c:122:10: warning: unused variable 'SSeps_sd_new' [-Wunused-variable]
  double SSeps_sd_new=0.;
         ^
estimation_slice.c:114:10: warning: unused variable 'l_epsilon' [-Wunused-variable]
  double l_epsilon=0,l_epsilon_new=0;
         ^
estimation_slice.c:114:22: warning: unused variable 'l_epsilon_new' [-Wunused-variable]
  double l_epsilon=0,l_epsilon_new=0;
                     ^
estimation_slice.c:115:10: warning: unused variable 'dens_epsilon' [-Wunused-variable]
  double dens_epsilon=0,dens_epsilon_new=0;
         ^
estimation_slice.c:113:27: warning: unused variable 'lambda_eps2_new' [-Wunused-variable]
  double lambda_eps1_new, lambda_eps2_new;
                          ^
estimation_slice.c:113:10: warning: unused variable 'lambda_eps1_new' [-Wunused-variable]
  double lambda_eps1_new, lambda_eps2_new;
         ^
estimation_slice.c:116:24: warning: unused variable 'SS12' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
                       ^
estimation_slice.c:117:10: warning: unused variable 'pi' [-Wunused-variable]
  double pi=3.14;
         ^
12 warnings generated.
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c ex_estimation_slice.c -o ex_estimation_slice.o
ex_estimation_slice.c:112:10: warning: unused variable 'pi' [-Wunused-variable]
  double pi=3.14;
         ^
ex_estimation_slice.c:143:10: warning: unused variable 'old_b' [-Wunused-variable]
  double old_b=0,width_b=5.;
         ^
ex_estimation_slice.c:144:10: warning: unused variable 'old_a' [-Wunused-variable]
  double old_a=0,width_a=1.;
         ^
ex_estimation_slice.c:119:10: warning: unused variable 'dens_t' [-Wunused-variable]
  double dens_t=0,dens_t_new=0;
         ^
ex_estimation_slice.c:119:19: warning: unused variable 'dens_t_new' [-Wunused-variable]
  double dens_t=0,dens_t_new=0;
                  ^
ex_estimation_slice.c:137:10: warning: unused variable 'sum_res1' [-Wunused-variable]
  double sum_res1;
         ^
ex_estimation_slice.c:138:10: warning: unused variable 'sum_res2' [-Wunused-variable]
  double sum_res2;
         ^
7 warnings generated.
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c mean.sd.c -o mean.sd.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c reorder.c -o reorder.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c util.c -o util.o
util.c:574:11: warning: unused variable 'k' [-Wunused-variable]
  int i,j,k;
          ^
util.c:629:13: warning: & has lower precedence than >; > will be evaluated first [-Wparentheses]
  while(K>0 & (z<log_f_L | z<log_f_R))
        ~~~~^
util.c:629:13: note: place parentheses around the '>' expression to silence this warning
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
        (  )
util.c:629:13: note: place parentheses around the & expression to evaluate it first
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
          (                          )
util.c:613:13: warning: unused variable 'v' [-Wunused-variable]
  double u, v, L, R, z, a1;
            ^
util.c:703:13: warning: & has lower precedence than >; > will be evaluated first [-Wparentheses]
  while(K>0 & (z<log_f_L | z<log_f_R))
        ~~~~^
util.c:703:13: note: place parentheses around the '>' expression to silence this warning
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
        (  )
util.c:703:13: note: place parentheses around the & expression to evaluate it first
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
          (                          )
util.c:686:13: warning: unused variable 'v' [-Wunused-variable]
  double u, v, L, R, z, b1;
            ^
util.c:876:13: warning: & has lower precedence than >; > will be evaluated first [-Wparentheses]
  while(K>0 & (z<log_f_L | z<log_f_R))
        ~~~~^
util.c:876:13: note: place parentheses around the '>' expression to silence this warning
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
        (  )
util.c:876:13: note: place parentheses around the & expression to evaluate it first
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
          (                          )
util.c:860:13: warning: unused variable 'v' [-Wunused-variable]
  double u, v, L, R, z, rho_new;
            ^
util.c:1019:13: warning: & has lower precedence than >; > will be evaluated first [-Wparentheses]
  while(K>0 & (z<log_f_L | z<log_f_R))
        ~~~~^
util.c:1019:13: note: place parentheses around the '>' expression to silence this warning
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
        (  )
util.c:1019:13: note: place parentheses around the & expression to evaluate it first
  while(K>0 & (z<log_f_L | z<log_f_R))
            ^
          (                          )
util.c:1000:13: warning: unused variable 'v' [-Wunused-variable]
  double u, v, L, R, z, shift_new;
            ^
util.c:1082:13: warning: unused variable 'v' [-Wunused-variable]
  double u, v, L, R, z, shift_new;
            ^
10 warnings generated.
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rama.so estimation_slice.o ex_estimation_slice.o mean.sd.o reorder.o util.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.1/Resources/library/00LOCK-rama/00new/rama/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rama)