############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/psygenet2r_1.26.0.tar.gz && rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL psygenet2r_1.26.0.zip && rm psygenet2r_1.26.0.tar.gz psygenet2r_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 19 1156k 19 220k 0 0 452k 0 0:00:02 --:--:-- 0:00:02 452k 100 1156k 100 1156k 0 0 839k 0 0:00:01 0:00:01 --:--:-- 840k install for i386 * installing *source* package 'psygenet2r' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'psygenet2r' finding HTML links ... done DataGeNET.Psy-class html JaccardIndexPsy-class html enrichedPD-methods html extract html extractSentences html geneAttrPlot-methods html getUMLs-methods html jaccardEstimation-methods html ndisease html ngene html pantherGraphic-methods html plot-DataGeNET.Psy-ANY-method html plot-JaccardIndexPsy-ANY-method html psygenet2r html psygenetDisease-methods html psygenetDiseaseSentences html psygenetGene-methods html psygenetGeneSentences html qr html topAnatEnrichment-methods html universe html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'psygenet2r' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'psygenet2r' as psygenet2r_1.26.0.zip * DONE (psygenet2r) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'psygenet2r' successfully unpacked and MD5 sums checked