############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/proActiv_1.4.0.tar.gz && rm -rf proActiv.buildbin-libdir && mkdir proActiv.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=proActiv.buildbin-libdir proActiv_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL proActiv_1.4.0.zip && rm proActiv_1.4.0.tar.gz proActiv_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 14 3469k 14 491k 0 0 935k 0 0:00:03 --:--:-- 0:00:03 936k 65 3469k 65 2289k 0 0 1503k 0 0:00:02 0:00:01 0:00:01 1503k 100 3469k 100 3469k 0 0 1760k 0 0:00:01 0:00:01 --:--:-- 1761k install for i386 * installing *source* package 'proActiv' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'proActiv' finding HTML links ... done PromoterAnnotation-class html boxplotPromoters html calculateJunctionReadCounts html calculatePromoterReadCounts html getAbsolutePromoterActivity html getAlternativePromoters html getGeneExpression html getRelativePromoterActivity html integrateProactiv html normalizePromoterReadCounts html plotHeatmap html plotPCA html preparePromoterAnnotation html proActiv html promoterAnnotation.gencode.v34.subset html reexports html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'proActiv' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'proActiv' as proActiv_1.4.0.zip * DONE (proActiv) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'proActiv' successfully unpacked and MD5 sums checked