############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pipeComp_1.4.0.tar.gz && rm -rf pipeComp.buildbin-libdir && mkdir pipeComp.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pipeComp.buildbin-libdir pipeComp_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pipeComp_1.4.0.zip && rm pipeComp_1.4.0.tar.gz pipeComp_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 1051k 0 2487 0 0 30316 0 0:00:35 --:--:-- 0:00:35 30329 100 1051k 100 1051k 0 0 1322k 0 --:--:-- --:--:-- --:--:-- 1321k install for i386 * installing *source* package 'pipeComp' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'pipeComp' finding HTML links ... done PipelineDefinition-methods html PipelineDefinition html addPipelineStep html aggregatePipelineResults html buildCombMatrix html checkPipelinePackages html clustMetricsCorr html colCenterScale html ctrlgenes html dea_evalPlot_curve html dea_pipeline html defaultStepAggregation html evalHeatmap html evaluateClustering html evaluateDEA html evaluateDimRed html evaluateNorm html exampleDEAresults html exampleResults html farthestPoint html getDimensionality html getQualitativePalette html match_evaluate_multiple html mergePipelineResults html mockPipeline html parsePipNames html pipeComp-package html plotElapsed html readPipelineResults html runPipeline html scrna_describeDatasets html scrna_evalPlot_filtering html scrna_evalPlot_overall html scrna_evalPlot_silh html scrna_pipeline html stableG html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'pipeComp' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'pipeComp' as pipeComp_1.4.0.zip * DONE (pipeComp) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'pipeComp' successfully unpacked and MD5 sums checked