############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/npGSEA_1.30.0.tar.gz && rm -rf npGSEA.buildbin-libdir && mkdir npGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=npGSEA.buildbin-libdir npGSEA_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL npGSEA_1.30.0.zip && rm npGSEA_1.30.0.tar.gz npGSEA_1.30.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 20643 100 20643 0 0 52424 0 --:--:-- --:--:-- --:--:-- 52393 100 20643 100 20643 0 0 52386 0 --:--:-- --:--:-- --:--:-- 52393 install for i386 * installing *source* package 'npGSEA' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA' ** help *** installing help indices converting help for package 'npGSEA' finding HTML links ... done DF-methods html alphaValue-methods html betaHats-methods html betaStat-methods html betaValue-methods html chiSqStat-methods html geneSetName-methods html getIncidence html npGSEA html npGSEAPlot-methods html npGSEAResultBeta-class html npGSEAResultBetaCollection-class html npGSEAResultChiSq-class html npGSEAResultChiSqCollection-class html npGSEAResultNorm-class html npGSEAResultNormCollection-class html pLeft-methods html pRight-methods html pTwoSided-methods html pValues-methods html show-methods html sigmaSq-methods html stat-methods html xSet-methods html zStat-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA' ** testing if installed package can be loaded from final location No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'npGSEA' ... ** testing if installed package can be loaded No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA' * MD5 sums packaged installation of 'npGSEA' as npGSEA_1.30.0.zip * DONE (npGSEA) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'npGSEA' successfully unpacked and MD5 sums checked