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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ngsReports_1.10.0.tar.gz && rm -rf ngsReports.buildbin-libdir && mkdir ngsReports.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ngsReports.buildbin-libdir ngsReports_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ngsReports_1.10.0.zip && rm ngsReports_1.10.0.tar.gz ngsReports_1.10.0.zip
###
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100  660k  100  660k    0     0  1103k      0 --:--:-- --:--:-- --:--:-- 1102k

install for i386

* installing *source* package 'ngsReports' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ngsReports'
    finding HTML links ... done
    FastqcData                              html  
    FastqcDataList                          html  
    PwfCols-class                           html  
    TheoreticalGC-class                     html  
    dot-FastqcFile-class                    html  
    dot-addPercent                          html  
    dot-emptyPlot                           html  
    dot-getToolName                         html  
    dot-hidePWFRects                        html  
    dot-isValidAdapterRemovalLog            html  
    dot-isValidBowtieLog                    html  
    dot-isValidBuscoLog                     html  
    dot-isValidCutadaptLog                  html  
    dot-isValidDuplicationMetricsLog        html  
    dot-isValidFeatureCountsLog             html  
    dot-isValidFlagstatLog                  html  
    dot-isValidHisat2Log                    html  
    dot-isValidMacs2CallpeakLog             html  
    dot-isValidQuastLog                     html  
    dot-isValidStarLog                      html  
    dot-isValidTrimmomaticLog               html  
    dot-makeDendro                          html  
    dot-makeLabels                          html  
    dot-makeSidebar                         html  
    dot-parseAdapterRemovalLogs             html  
    dot-parseBowtieLogs                     html  
    dot-parseBuscoLogs                      html  
    dot-parseCutadaptLogs                   html  
    dot-parseDuplicationMetricsLogs         html  
    dot-parseFeatureCountsLogs              html  
    dot-parseFlagstatLogs                   html  
    dot-parseHisat2Logs                     html  
    dot-parseMacs2CallpeakLogs              html  
    dot-parseQuastLogs                      html  
    dot-parseStarLogs                       html  
    dot-parseTrimmomaticLogs                html  
    dot-renderDendro                        html  
    dot-scale_fill_pwf                      html  
    dot-splitByTab                          html  
    estGcDistn                              html  
    extract-methods                         html  
    fqName-methods                          html  
    fqcVersion                              html  
    gcAvail                                 html  
    gcTheoretical                           html  
    getColours-methods                      html  
    getGC                                   html  
    getModule                               html  
    getSummary                              html  
    importNgsLogs                           html  
    importSJ                                html  
    isCompressed                            html  
    mData                                   html  
    maxAdapterContent                       html  
    overRep2Fasta-methods                   html  
    path                                    html  
    plotAdapterContent-methods              html  
    plotAlignmentSummary                    html  
    plotAssemblyStats                       html  
    plotBaseQuals-methods                   html  
    plotDupLevels-methods                   html  
    plotFastqcPCA-methods                   html  
    plotGcContent-methods                   html  
    plotKmers-methods                       html  
    plotNContent-methods                    html  
    plotOverrep-methods                     html  
    plotReadTotals-methods                  html  
    plotSeqContent-methods                  html  
    plotSeqLengthDistn-methods              html  
    plotSeqQuals-methods                    html  
    plotSummary-methods                     html  
    pwf                                     html  
    readTotals                              html  
    runFastQC-methods                       html  
    writeHtmlReport                         html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ngsReports' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ngsReports' as ngsReports_1.10.0.zip
* DONE (ngsReports)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ngsReports' successfully unpacked and MD5 sums checked