############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf ngsReports.buildbin-libdir && mkdir ngsReports.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ngsReports.buildbin-libdir ngsReports_1.10.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'ngsReports' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ngsReports' finding HTML links ... done FastqcData html FastqcDataList html PwfCols-class html TheoreticalGC-class html dot-FastqcFile-class html dot-addPercent html dot-emptyPlot html dot-getToolName html dot-hidePWFRects html dot-isValidAdapterRemovalLog html dot-isValidBowtieLog html dot-isValidBuscoLog html dot-isValidCutadaptLog html dot-isValidDuplicationMetricsLog html dot-isValidFeatureCountsLog html dot-isValidFlagstatLog html dot-isValidHisat2Log html dot-isValidMacs2CallpeakLog html dot-isValidQuastLog html dot-isValidStarLog html dot-isValidTrimmomaticLog html dot-makeDendro html dot-makeLabels html dot-makeSidebar html dot-parseAdapterRemovalLogs html dot-parseBowtieLogs html dot-parseBuscoLogs html dot-parseCutadaptLogs html dot-parseDuplicationMetricsLogs html dot-parseFeatureCountsLogs html dot-parseFlagstatLogs html dot-parseHisat2Logs html dot-parseMacs2CallpeakLogs html dot-parseQuastLogs html dot-parseStarLogs html dot-parseTrimmomaticLogs html dot-renderDendro html dot-scale_fill_pwf html dot-splitByTab html estGcDistn html extract-methods html fqName-methods html fqcVersion html gcAvail html gcTheoretical html getColours-methods html getGC html getModule html getSummary html importNgsLogs html importSJ html isCompressed html mData html maxAdapterContent html overRep2Fasta-methods html path html plotAdapterContent-methods html plotAlignmentSummary html plotAssemblyStats html plotBaseQuals-methods html plotDupLevels-methods html plotFastqcPCA-methods html plotGcContent-methods html plotKmers-methods html plotNContent-methods html plotOverrep-methods html plotReadTotals-methods html plotSeqContent-methods html plotSeqLengthDistn-methods html plotSeqQuals-methods html plotSummary-methods html pwf html readTotals html runFastQC-methods html writeHtmlReport html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ngsReports' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ngsReports' as ngsReports_1.10.0.zip * DONE (ngsReports)