############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data netboxr ### ############################################################################## ############################################################################## * checking for file ‘netboxr/DESCRIPTION’ ... OK * preparing ‘netboxr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘netboxrTutorial.Rmd’ using rmarkdown Loading required package: igraph Attaching package: 'igraph' The following objects are masked from 'package:stats': decompose, spectrum The following object is masked from 'package:base': union Loading required package: parallel Registered S3 method overwritten by 'ggtree': method from identify.gg ggfun Quitting from lines 298-305 (netboxrTutorial.Rmd) Error: processing vignette 'netboxrTutorial.Rmd' failed with diagnostics: object 'graphRedu' not found --- failed re-building ‘netboxrTutorial.Rmd’ SUMMARY: processing the following file failed: ‘netboxrTutorial.Rmd’ Error: Vignette re-building failed. Execution halted