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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/nanotatoR_1.10.0.tar.gz && rm -rf nanotatoR.buildbin-libdir && mkdir nanotatoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nanotatoR.buildbin-libdir nanotatoR_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL nanotatoR_1.10.0.zip && rm nanotatoR_1.10.0.tar.gz nanotatoR_1.10.0.zip
###
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100  214k  100  214k    0     0   629k      0 --:--:-- --:--:-- --:--:--  631k

install for i386

* installing *source* package 'nanotatoR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'nanotatoR'
    finding HTML links ... done
    BNDBfrequency                           html  
    DGVfrequency                            html  
    Decipherfrequency                       html  
    FamilyInfoPrep                          html  
    OverlapRNAseq                           html  
    OverlapRNAseq_solo                      html  
    RNAseqcombine                           html  
    RNAseqcombine_solo                      html  
    SVexpression_duo_trio                   html  
    SVexpression_solo                       html  
    buildrunBNBedFiles                      html  
    clinvar_gene                            html  
    extract_clinvar_mod                     html  
    gene_extraction                         html  
    gene_list_generation                    html  
    gtr_gene                                html  
    internalFrequencyTrio_Duo               html  
    internalFrequency_solo                  html  
    makeInternalBNDatabase                  html  
    mergingSMAP_SE                          html  
    mergingSMAP_SVMerge                     html  
    merging_SE_SVMerge                      html  
    nanotatoR                               html  
    nanotatoR_Duo_SVmerge                   html  
    nanotatoR_SVmerge_Trio                  html  
    nanotatoR_main_Duo_SE                   html  
    nanotatoR_main_Solo_SE                  html  
    nanotatoR_main_Solo_SVmerge             html  
    nanotatoR_main_Trio_SE                  html  
    nonOverlapGenes                         html  
    nonOverlapRNAseq                        html  
    nonOverlapRNAseq_solo                   html  
    nonOverlappingDNGenes                   html  
    nonOverlappingUPGenes                   html  
    omim_gene                               html  
    overlapGenes                            html  
    overlapnearestgeneSearch                html  
    overlappingGenes                        html  
    phenoextractHPO_mod                     html  
    readBNBedFiles                          html  
    readSMap                                html  
    readSMap_DLE                            html  
    reading_GTR                             html  
    reading_mim2gene                        html  
    run_bionano_filter_SE_Trio              html  
    run_bionano_filter_SE_duo               html  
    run_bionano_filter_SE_solo              html  
    run_bionano_filter_SVMerge_Trio         html  
    run_bionano_filter_SVMerge_duo          html  
    run_bionano_filter_SVMerge_solo         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'nanotatoR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'nanotatoR' as nanotatoR_1.10.0.zip
* DONE (nanotatoR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'nanotatoR' successfully unpacked and MD5 sums checked