############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf nanotatoR.buildbin-libdir && mkdir nanotatoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nanotatoR.buildbin-libdir nanotatoR_1.10.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'nanotatoR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nanotatoR' finding HTML links ... done BNDBfrequency html DGVfrequency html Decipherfrequency html FamilyInfoPrep html OverlapRNAseq html OverlapRNAseq_solo html RNAseqcombine html RNAseqcombine_solo html SVexpression_duo_trio html SVexpression_solo html buildrunBNBedFiles html clinvar_gene html extract_clinvar_mod html gene_extraction html gene_list_generation html gtr_gene html internalFrequencyTrio_Duo html internalFrequency_solo html makeInternalBNDatabase html mergingSMAP_SE html mergingSMAP_SVMerge html merging_SE_SVMerge html nanotatoR html nanotatoR_Duo_SVmerge html nanotatoR_SVmerge_Trio html nanotatoR_main_Duo_SE html nanotatoR_main_Solo_SE html nanotatoR_main_Solo_SVmerge html nanotatoR_main_Trio_SE html nonOverlapGenes html nonOverlapRNAseq html nonOverlapRNAseq_solo html nonOverlappingDNGenes html nonOverlappingUPGenes html omim_gene html overlapGenes html overlapnearestgeneSearch html overlappingGenes html phenoextractHPO_mod html readBNBedFiles html readSMap html readSMap_DLE html reading_GTR html reading_mim2gene html run_bionano_filter_SE_Trio html run_bionano_filter_SE_duo html run_bionano_filter_SE_solo html run_bionano_filter_SVMerge_Trio html run_bionano_filter_SVMerge_duo html run_bionano_filter_SVMerge_solo html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'nanotatoR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'nanotatoR' as nanotatoR_1.10.0.zip * DONE (nanotatoR)