Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:55 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for monaLisa on tokay2


To the developers/maintainers of the monaLisa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/monaLisa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1194/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
monaLisa 1.0.0  (landing page)
Michael Stadler
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/monaLisa
git_branch: RELEASE_3_14
git_last_commit: bec40ca
git_last_commit_date: 2021-10-26 13:12:48 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: monaLisa
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/monaLisa_1.0.0.tar.gz && rm -rf monaLisa.buildbin-libdir && mkdir monaLisa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=monaLisa.buildbin-libdir monaLisa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL monaLisa_1.0.0.zip && rm monaLisa_1.0.0.tar.gz monaLisa_1.0.0.zip
StartedAt: 2022-04-12 06:34:07 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:35:44 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 96.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/monaLisa_1.0.0.tar.gz && rm -rf monaLisa.buildbin-libdir && mkdir monaLisa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=monaLisa.buildbin-libdir monaLisa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL monaLisa_1.0.0.zip && rm monaLisa_1.0.0.tar.gz monaLisa_1.0.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 13 2707k   13  367k    0     0   752k      0  0:00:03 --:--:--  0:00:03  753k
 68 2707k   68 1867k    0     0  1284k      0  0:00:02  0:00:01  0:00:01 1284k
100 2707k  100 2707k    0     0  1482k      0  0:00:01  0:00:01 --:--:-- 1482k

install for i386

* installing *source* package 'monaLisa' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'monaLisa'
    finding HTML links ... done
    annoSeqlogo                             html  
    bin                                     html  
    calcBinnedKmerEnr                       html  
    calcBinnedMotifEnrHomer                 html  
    calcBinnedMotifEnrR                     html  
    dot-calcKmerEnrichment                  html  
    dot-calcMotifEnrichment                 html  
    dot-calculateGCweight                   html  
    dot-checkDfValidity                     html  
    dot-checkIfSeqsAreEqualLength           html  
    dot-cons2matrix                         html  
    dot-defineBackground                    html  
    dot-filterSeqs                          html  
    dot-glmnetRandomizedLasso               html  
    dot-iterativeNormForKmers               html  
    dot-normForKmers                        html  
    dumpJaspar                              html  
    findHomer                               html  
    findMotifHits-methods                   html  
    getColsByBin                            html  
    getKmerFreq                             html  
    finding level-2 HTML links ... done

    getSetZeroBin                           html  
    homerToPFMatrixList                     html  
    monaLisa-package                        html  
    motifKmerSimilarity                     html  
    motifSimilarity                         html  
    parseHomerOutput                        html  
    plotBinDensity                          html  
    plotBinDiagnostics                      html  
    plotBinHist                             html  
    plotBinScatter                          html  
    plotMotifHeatmaps                       html  
    plotSelectionProb                       html  
    plotStabilityPaths                      html  
    prepareHomer                            html  
    randLassoStabSel                        html  
    sampleRandomRegions                     html  
    seqLogoGrob                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'monaLisa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'monaLisa' as monaLisa_1.0.0.zip
* DONE (monaLisa)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'monaLisa' successfully unpacked and MD5 sums checked