############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/mirTarRnaSeq_1.2.0.tar.gz && rm -rf mirTarRnaSeq.buildbin-libdir && mkdir mirTarRnaSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mirTarRnaSeq.buildbin-libdir mirTarRnaSeq_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL mirTarRnaSeq_1.2.0.zip && rm mirTarRnaSeq_1.2.0.tar.gz mirTarRnaSeq_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 19 4043k 19 804k 0 0 939k 0 0:00:04 --:--:-- 0:00:04 939k 65 4043k 65 2668k 0 0 1440k 0 0:00:02 0:00:01 0:00:01 1440k 100 4043k 100 4043k 0 0 1704k 0 0:00:02 0:00:02 --:--:-- 1705k install for i386 * installing *source* package 'mirTarRnaSeq' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'mirTarRnaSeq' finding HTML links ... done Combine html canonicalModel_ html combiner html corMirnaRna html corMirnaRnaMiranda html corr_0 html downloadMirandaFile html drawCorPlot html drawInterPlots html fdrSig html finInterResult html final_results html geneVari html geneVariant html getInputSpecies html glm_gaussian html glm_multi html glm_nb html glm_poisson html glm_zeroinfl html glm_zeroinfl_negbin html glm_zeroinfl_poisson html importMirandaFile html inter0 html mRNA html mRNA0_2 html mRNA0_5 html mRNA2_5 html mRNA_fc html mRNA_fc2 html makeFormulaRightSide html miRNA html miRNA0_2 html miRNA0_5 html miRNA2_5 html miRNA_fc html miRNA_fc2 html miRanComp html miRanda html miRandaIntersect html miRandaM html mirRnaDensityCor html mirRnaDensityInter html mirRnaHeatmap html mirRnaHeatmapDiff html mirandaIntersectInter html modelAIC html modelCoefficients html modelData html modelModelName html modelModelPvalue html modelTermPvalues html modelsFilter html one2OneRnaMiRNA html outs html outs2 html plotFit html plotResiduals html plotTerms html results html runAllMirnaModels html runModel html runModels html sampCorRnaMirna html sig_InterR html sig_corrs html some_model html threshSig html threshSigInter html twoTimePoint html twoTimePointSamp html tzTrans html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'mirTarRnaSeq' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'mirTarRnaSeq' as mirTarRnaSeq_1.2.0.zip * DONE (mirTarRnaSeq) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'mirTarRnaSeq' successfully unpacked and MD5 sums checked