############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf microbiomeMarker.buildbin-libdir && mkdir microbiomeMarker.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microbiomeMarker.buildbin-libdir microbiomeMarker_1.0.2.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'microbiomeMarker' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'microbiomeMarker' finding HTML links ... done abundances-methods html finding level-2 HTML links ... done aggregate_taxa html assign-marker_table html assign-otu_table html data-caporaso html data-cid_ying html data-ecam html data-enterotypes_arumugam html data-kostic_crc html data-oxygen html data-pediatric_ibd html data-spontaneous_colitis html effect_size-plot html extract-methods html extract_posthoc_res html get_treedata_phyloseq html import_dada2 html import_picrust2 html import_qiime2 html marker_table-class html marker_table-methods html microbiomeMarker-class html microbiomeMarker-package html microbiomeMarker html nmarker-methods html normalize-methods html phyloseq2DESeq2 html phyloseq2edgeR html phyloseq2metagenomeSeq html plot_abundance html plot_cladogram html plot_heatmap html plot_postHocTest html plot_sl_roc html postHocTest-class html postHocTest html reexports html run_aldex html run_ancom html run_ancombc html run_deseq2 html run_edger html run_lefse html run_limma_voom html run_marker html run_metagenomeseq html run_posthoc_test html run_simple_stat html run_sl html run_test_multiple_groups html run_test_two_groups html subset_marker html summarize_taxa html transform_abundances html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'microbiomeMarker' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'microbiomeMarker' as microbiomeMarker_1.0.2.zip * DONE (microbiomeMarker)