############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/intansv_1.34.0.tar.gz && rm -rf intansv.buildbin-libdir && mkdir intansv.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=intansv.buildbin-libdir intansv_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL intansv_1.34.0.zip && rm intansv_1.34.0.tar.gz intansv_1.34.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 45 484k 45 221k 0 0 836k 0 --:--:-- --:--:-- --:--:-- 835k 100 484k 100 484k 0 0 1171k 0 --:--:-- --:--:-- --:--:-- 1172k install for i386 * installing *source* package 'intansv' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'intansv' finding HTML links ... done methodsMerge html plotChromosome html plotRegion html readBreakDancer html readCnvnator html readDelly html readLumpy html readPindel html readSoftSearch html readSvseq html svAnnotation html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'intansv' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'intansv' as intansv_1.34.0.zip * DONE (intansv) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'intansv' successfully unpacked and MD5 sums checked