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This page was generated on 2022-04-13 12:06:44 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for imcRtools on tokay2


To the developers/maintainers of the imcRtools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/imcRtools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 923/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
imcRtools 1.0.2  (landing page)
Nils Eling
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/imcRtools
git_branch: RELEASE_3_14
git_last_commit: a8d93e1
git_last_commit_date: 2021-12-15 15:43:00 -0400 (Wed, 15 Dec 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: imcRtools
Version: 1.0.2
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/imcRtools_1.0.2.tar.gz && rm -rf imcRtools.buildbin-libdir && mkdir imcRtools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=imcRtools.buildbin-libdir imcRtools_1.0.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL imcRtools_1.0.2.zip && rm imcRtools_1.0.2.tar.gz imcRtools_1.0.2.zip
StartedAt: 2022-04-12 06:41:51 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:50:24 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 513.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/imcRtools_1.0.2.tar.gz && rm -rf imcRtools.buildbin-libdir && mkdir imcRtools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=imcRtools.buildbin-libdir imcRtools_1.0.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL imcRtools_1.0.2.zip && rm imcRtools_1.0.2.tar.gz imcRtools_1.0.2.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 84  990k   84  836k    0     0  1241k      0 --:--:-- --:--:-- --:--:-- 1241k
100  990k  100  990k    0     0   907k      0  0:00:01  0:00:01 --:--:--  908k

install for i386

* installing *source* package 'imcRtools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'imcRtools'
    finding HTML links ... done
    aggregateNeighbors                      html  
    binAcrossPixels                         html  
    buildSpatialGraph                       html  
    countInteractions                       html  
    filterPixels                            html  
    findBorderCells                         html  
    patchDetection                          html  
    plotSpatial                             html  
    finding level-2 HTML links ... done

    plotSpotHeatmap                         html  
    readImagefromTXT                        html  
    readSCEfromTXT                          html  
    read_cpout                              html  
    read_steinbock                          html  
    show_cpout_features                     html  
    testInteractions                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'imcRtools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'imcRtools' as imcRtools_1.0.2.zip
* DONE (imcRtools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'imcRtools' successfully unpacked and MD5 sums checked