############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/gwascat_2.26.0.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL gwascat_2.26.0.zip && rm gwascat_2.26.0.tar.gz gwascat_2.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 1 32.8M 1 614k 0 0 1253k 0 0:00:26 --:--:-- 0:00:26 1253k 8 32.8M 8 2929k 0 0 1967k 0 0:00:17 0:00:01 0:00:16 1967k 18 32.8M 18 6178k 0 0 2479k 0 0:00:13 0:00:02 0:00:11 2479k 28 32.8M 28 9472k 0 0 2711k 0 0:00:12 0:00:03 0:00:09 2711k 36 32.8M 36 12.0M 0 0 2753k 0 0:00:12 0:00:04 0:00:08 2753k 47 32.8M 47 15.4M 0 0 2889k 0 0:00:11 0:00:05 0:00:06 3050k 55 32.8M 55 18.0M 0 0 2852k 0 0:00:11 0:00:06 0:00:05 3116k 65 32.8M 65 21.5M 0 0 2945k 0 0:00:11 0:00:07 0:00:04 3178k 78 32.8M 78 25.9M 0 0 3125k 0 0:00:10 0:00:08 0:00:02 3413k 94 32.8M 94 31.1M 0 0 3364k 0 0:00:09 0:00:09 --:--:-- 3914k 100 32.8M 100 32.8M 0 0 3443k 0 0:00:09 0:00:09 --:--:-- 4157k install for i386 * installing *source* package 'gwascat' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gwascat' finding HTML links ... done bindcadd_snv html chklocs html ebicat_2020_04_30 html g17SM html getRsids-gwaswloc-method html getRsids html getTraits-gwaswloc-method html getTraits html get_cached_gwascat html gg17N html gr6.0_hg38 html gw6.rs_17 html gwascat_from_AHub html gwastagger html gwaswloc-class html gwcat_snapshot html gwcex2gviz html ldtagr html locon6 html locs4trait html low17 html makeCurrentGwascat html obo2graphNEL html process_gwas_dataframe html riskyAlleleCount html si.hs.37 html si.hs.38 html sub-gwaswloc-ANY-ANY-ANY-method html subsetByChromosome-gwaswloc-method html subsetByChromosome html subsetByTraits-gwaswloc-method html subsetByTraits html topTraits html traitsManh html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gwascat' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'gwascat' as gwascat_2.26.0.zip * DONE (gwascat) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'gwascat' successfully unpacked and MD5 sums checked