############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/geneClassifiers_1.18.0.tar.gz && rm -rf geneClassifiers.buildbin-libdir && mkdir geneClassifiers.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneClassifiers.buildbin-libdir geneClassifiers_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL geneClassifiers_1.18.0.zip && rm geneClassifiers_1.18.0.tar.gz geneClassifiers_1.18.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 41 1280k 41 529k 0 0 621k 0 0:00:02 --:--:-- 0:00:02 621k 100 1280k 100 1280k 0 0 747k 0 0:00:01 0:00:01 --:--:-- 747k install for i386 * installing *source* package 'geneClassifiers' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'geneClassifiers' finding HTML links ... done ClassifierParameters html ClassifierResults html FixedExpressionData html bracket-methods html dim-methods html exampleMAS5 html finding level-2 HTML links ... done geneClassifiers-package html getBatchCorrection-methods html getCitations-methods html getClassifications-methods html getClassifier-methods html getDecisionBoundaries-methods html getDescription-methods html getEventChain-methods html getIntercept-methods html getMeans-methods html getName-methods html getNormalizationMethod-methods html getProbeNames-methods html getScores-methods html getSds-methods html getTargetValue-methods html getTrainingData-methods html getWeightingType-methods html getWeights-methods html runClassifier-methods html setNormalizationMethod-methods html showClassifierList-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'geneClassifiers' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'geneClassifiers' as geneClassifiers_1.18.0.zip * DONE (geneClassifiers) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'geneClassifiers' successfully unpacked and MD5 sums checked