############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/diffcyt_1.14.0.tar.gz && rm -rf diffcyt.buildbin-libdir && mkdir diffcyt.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diffcyt.buildbin-libdir diffcyt_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL diffcyt_1.14.0.zip && rm diffcyt_1.14.0.tar.gz diffcyt_1.14.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 187k 100 187k 0 0 750k 0 --:--:-- --:--:-- --:--:-- 753k install for i386 * installing *source* package 'diffcyt' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'diffcyt' finding HTML links ... done calcCounts html finding level-2 HTML links ... done calcMedians html calcMediansByClusterMarker html calcMediansBySampleMarker html createContrast html createDesignMatrix html createFormula html diffcyt html generateClusters html plotHeatmap html prepareData html testDA_GLMM html testDA_edgeR html testDA_voom html testDS_LMM html testDS_limma html topClusters html topTable html transformData html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'diffcyt' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'diffcyt' as diffcyt_1.14.0.zip * DONE (diffcyt) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'diffcyt' successfully unpacked and MD5 sums checked