############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/derfinder_1.28.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL derfinder_1.28.0.zip && rm derfinder_1.28.0.tar.gz derfinder_1.28.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 255k 100 255k 0 0 843k 0 --:--:-- --:--:-- --:--:-- 847k install for i386 * installing *source* package 'derfinder' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'derfinder' finding HTML links ... done analyzeChr html annotateRegions html calculatePvalues html calculateStats html coerceGR html collapseFullCoverage html coverageToExon html createBw html createBwSample html define_cluster html derfinder-deprecated html derfinder-package html extendedMapSeqlevels html filterData html findRegions html fullCoverage html genomeData html genomeDataRaw html genomeFstats html genomeInfo html genomeRegions html genomicState html getRegionCoverage html getTotalMapped html loadCoverage html makeGenomicState html makeModels html mergeResults html preprocessCoverage html railMatrix html rawFiles html regionMatrix html sampleDepth html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'derfinder' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'derfinder' as derfinder_1.28.0.zip * DONE (derfinder) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'derfinder' successfully unpacked and MD5 sums checked