Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:22 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for combi on tokay2


To the developers/maintainers of the combi package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/combi.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 374/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
combi 1.6.0  (landing page)
Joris Meys
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/combi
git_branch: RELEASE_3_14
git_last_commit: dcf1756
git_last_commit_date: 2021-10-26 12:58:09 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: combi
Version: 1.6.0
Command: rm -rf combi.buildbin-libdir && mkdir combi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=combi.buildbin-libdir combi_1.6.0.tar.gz
StartedAt: 2022-04-13 05:55:18 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 05:56:30 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 72.5 seconds
RetCode: 0
Status:   OK  
PackageFile: combi_1.6.0.zip
PackageFileSize: 1.299 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf combi.buildbin-libdir && mkdir combi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=combi.buildbin-libdir combi_1.6.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'combi' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'combi'
    finding HTML links ... done
    addLink                                 html  
    arrayMult                               html  
    buildCentMat                            html  
    buildCompMat                            html  
    buildConfMat                            html  
    buildCovMat                             html  
    buildEmptyJac                           html  
    buildMarginalOffset                     html  
    buildMu                                 html  
    buildMuMargins                          html  
    buildOffsetModel                        html  
    checkAlias                              html  
    checkMeanVarTrend                       html  
    checkMonotonicity                       html  
    combi                                   html  
    convPlot                                html  
    deriv2LagrangianFeatures                html  
    deriv2LagrangianLatentVars              html  
    deriv2LagrangianLatentVarsConstr        html  
    derivLagrangianFeatures                 html  
    derivLagrangianLatentVars               html  
    derivLagrangianLatentVarsConstr         html  
    estFeatureParameters                    html  
    estIndepModel                           html  
    estLatentVars                           html  
    estMeanVarTrend                         html  
    estOff                                  html  
    extractCoords                           html  
    extractData                             html  
    extractMat                              html  
    filterConfounders                       html  
    getInflLatentVar                        html  
    gramSchmidtOrth                         html  
    indentPlot                              html  
    inflPlot                                html  
    influence.combi                         html  
    jacConfounders                          html  
    jacConfoundersComp                      html  
    jacFeatures                             html  
    jacLatentVars                           html  
    jacLatentVarsConstr                     html  
    plot.combi                              html  
    polyHorner                              html  
    predictSpline                           html  
    prepareJacMat                           html  
    prepareJacMatComp                       html  
    prepareScoreMat                         html  
    print.combi                             html  
    quasiJacIndep                           html  
    quasiScoreIndep                         html  
    rowMultiply                             html  
    scaleCoords                             html  
    scoreConfounders                        html  
    scoreConfoundersComp                    html  
    scoreFeatureParams                      html  
    scoreLatentVars                         html  
    seqM                                    html  
    trimOnConfounders                       html  
    zhangMetabo                             html  
    zhangMetavars                           html  
    zhangMicrobio                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'combi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'combi' as combi_1.6.0.zip
* DONE (combi)