############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/circRNAprofiler_1.8.0.tar.gz && rm -rf circRNAprofiler.buildbin-libdir && mkdir circRNAprofiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=circRNAprofiler.buildbin-libdir circRNAprofiler_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL circRNAprofiler_1.8.0.zip && rm circRNAprofiler_1.8.0.tar.gz circRNAprofiler_1.8.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 4 3616k 4 171k 0 0 453k 0 0:00:07 --:--:-- 0:00:07 452k 36 3616k 36 1330k 0 0 963k 0 0:00:03 0:00:01 0:00:02 963k 93 3616k 93 3398k 0 0 1427k 0 0:00:02 0:00:02 --:--:-- 1427k 100 3616k 100 3616k 0 0 1472k 0 0:00:02 0:00:02 --:--:-- 1472k install for i386 * installing *source* package 'circRNAprofiler' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'circRNAprofiler' finding HTML links ... done ahChainFiles html ahRepeatMasker html annotateBSJs html annotateRepeats html finding level-2 HTML links ... done annotateSNPsGWAS html attractSpecies html backSplicedJunctions html checkProjectFolder html filterCirc html formatGTF html getBackSplicedJunctions html getCircSeqs html getDeseqRes html getDetectionTools html getEdgerRes html getMiRsites html getMotifs html getRandomBSJunctions html getRegexPattern html getSeqsAcrossBSJs html getSeqsFromGRs html gtf html gwasTraits html importCircExplorer2 html importCircMarker html importKnife html importMapSplice html importNCLscan html importOther html importUroborus html initCircRNAprofiler html iupac html liftBSJcoords html memeDB html mergeBSJunctions html mergeMotifs html mergedBSJunctions html miRspeciesCodes html plotExBetweenBSEs html plotExPosition html plotHostGenes html plotLenBSEs html plotLenIntrons html plotMiR html plotMotifs html plotTotExons html rearrangeMiRres html volcanoPlot html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'circRNAprofiler' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'circRNAprofiler' as circRNAprofiler_1.8.0.zip * DONE (circRNAprofiler) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'circRNAprofiler' successfully unpacked and MD5 sums checked