Sarah Williams
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/celaref |
| git_branch: RELEASE_3_14 |
| git_last_commit: 45b360b |
| git_last_commit_date: 2021-10-26 12:46:08 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:17 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the celaref package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/celaref.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 260/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| celaref 1.12.0 (landing page) Sarah Williams
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: celaref |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/celaref_1.12.0.tar.gz && rm -rf celaref.buildbin-libdir && mkdir celaref.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=celaref.buildbin-libdir celaref_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL celaref_1.12.0.zip && rm celaref_1.12.0.tar.gz celaref_1.12.0.zip |
| StartedAt: 2022-04-12 06:30:50 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:32:35 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 104.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/celaref_1.12.0.tar.gz && rm -rf celaref.buildbin-libdir && mkdir celaref.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=celaref.buildbin-libdir celaref_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL celaref_1.12.0.zip && rm celaref_1.12.0.tar.gz celaref_1.12.0.zip
###
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install for i386
* installing *source* package 'celaref' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'celaref'
finding HTML links ... done
contrast_each_group_to_the_rest html
contrast_each_group_to_the_rest_for_norm_ma_with_limma
html
contrast_the_group_to_the_rest html
contrast_the_group_to_the_rest_with_limma_for_microarray
html
convert_se_gene_ids html
de_table.demo_query html
de_table.demo_ref html
demo_cell_info_table html
demo_counts_matrix html
demo_gene_info_table html
demo_microarray_expr html
demo_microarray_sample_sheet html
demo_query_se html
demo_ref_se html
find_within_match_differences html
get_counts_index html
get_inner_or_outer_ci html
get_limma_top_table_with_ci html
get_matched_stepped_mwtest_res_table html
get_ranking_and_test_results html
get_rankstat_table html
get_reciprocal_matches html
get_stepped_pvals_str html
get_the_up_genes_for_all_possible_groups
html
get_the_up_genes_for_group html
get_vs_random_pval html
load_dataset_10Xdata html
load_se_from_tables html
make_ranking_violin_plot html
make_ref_similarity_names html
make_ref_similarity_names_for_group html
run_pair_test_stats html
subset_cells_by_group html
subset_se_cells_for_group_test html
trim_small_groups_and_low_expression_genes
html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'celaref' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'celaref' as celaref_1.12.0.zip
* DONE (celaref)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'celaref' successfully unpacked and MD5 sums checked