############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/biomaRt_2.50.3.tar.gz && rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.50.3.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL biomaRt_2.50.3.zip && rm biomaRt_2.50.3.tar.gz biomaRt_2.50.3.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 120k 100 120k 0 0 254k 0 --:--:-- --:--:-- --:--:-- 255k install for i386 * installing *source* package 'biomaRt' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'biomaRt' finding HTML links ... done Mart-class html NP2009code html attributePages html biomaRt-deprecated html biomartCache html exportFASTA html filterType html getBM html getGene html getLDS html getSequence html listAttributes html listDatasets html listEnsembl html listEnsemblArchives html listFilterValues html listFilters html listMarts html select html useDataset html useEnsembl html useMart html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'biomaRt' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'biomaRt' as biomaRt_2.50.3.zip * DONE (biomaRt) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'biomaRt' successfully unpacked and MD5 sums checked