Back to Multiple platform build/check report for BioC 3.14
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-01-21 13:05:55 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for affycoretools on tokay2


To the developers/maintainers of the affycoretools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/affycoretools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 27/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
affycoretools 1.66.0  (landing page)
James W. MacDonald
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/affycoretools
git_branch: RELEASE_3_14
git_last_commit: 6bf769d
git_last_commit_date: 2021-10-26 11:48:47 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: affycoretools
Version: 1.66.0
Command: rm -rf affycoretools.buildbin-libdir && mkdir affycoretools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=affycoretools.buildbin-libdir affycoretools_1.66.0.tar.gz
StartedAt: 2022-01-21 05:29:08 -0500 (Fri, 21 Jan 2022)
EndedAt: 2022-01-21 05:31:59 -0500 (Fri, 21 Jan 2022)
EllapsedTime: 171.8 seconds
RetCode: 0
Status:   OK  
PackageFile: affycoretools_1.66.0.zip
PackageFileSize: 627.3 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf affycoretools.buildbin-libdir && mkdir affycoretools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=affycoretools.buildbin-libdir affycoretools_1.66.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'affycoretools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'affycoretools'
    finding HTML links ... done
    affycoretools-defunct                   html  
    affycoretools                           html  
    affystart                               html  
    annotateEset                            html  
    dataAndHeatmapPage                      html  
    doGlimma                                html  
    entrezLinks                             html  
    fixHeaderAndGo                          html  
    geneSetPage                             html  
    finding level-2 HTML links ... done

    getCols                                 html  
    getMainProbes                           html  
    gsHeatmap                               html  
    intNames                                html  
    make.cl                                 html  
    makeGoGeneTable                         html  
    makeGoTable                             html  
    makeHmap                                html  
    makeImages                              html  
    makeIndices                             html  
    makeVenn                                html  
    maplot                                  html  
    mirna2mrna                              html  
    outputRomer                             html  
    pca.legend                              html  
    plotDeg                                 html  
    plotPCA                                 html  
    runRomer                                html  
    tableFilt                               html  
    venn4Way                                html  
    vennCounts2                             html  
    vennInLine                              html  
    vennPage                                html  
    vennSelect2                             html  
    writeFit                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'affycoretools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'affycoretools' as affycoretools_1.66.0.zip
* DONE (affycoretools)