############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/XCIR_1.8.0.tar.gz && rm -rf XCIR.buildbin-libdir && mkdir XCIR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XCIR.buildbin-libdir XCIR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL XCIR_1.8.0.zip && rm XCIR_1.8.0.tar.gz XCIR_1.8.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 27 1969k 27 544k 0 0 969k 0 0:00:02 --:--:-- 0:00:02 970k 100 1969k 100 1969k 0 0 1432k 0 0:00:01 0:00:01 --:--:-- 1433k install for i386 * installing *source* package 'XCIR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'XCIR' finding HTML links ... done BetaConversion html XCIR-package html addAnno html annotateX html annotates_snps html betaBinomXI html consensusXCI html getGenicDP html getXCIstate html mart_genes html plotQC html readRNASNPs html readVCF4 html readXCI html readXVcf html sample_clean html xci_calls html xci_qc html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'XCIR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'XCIR' as XCIR_1.8.0.zip * DONE (XCIR) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'XCIR' successfully unpacked and MD5 sums checked