############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/VariantExperiment_1.8.0.tar.gz && rm -rf VariantExperiment.buildbin-libdir && mkdir VariantExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VariantExperiment.buildbin-libdir VariantExperiment_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL VariantExperiment_1.8.0.zip && rm VariantExperiment_1.8.0.tar.gz VariantExperiment_1.8.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 97 30260 97 29513 0 0 136k 0 --:--:-- --:--:-- --:--:-- 136k 100 30260 100 30260 0 0 76152 0 --:--:-- --:--:-- --:--:-- 76221 install for i386 * installing *source* package 'VariantExperiment' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'VariantExperiment' finding HTML links ... done VariantExperiment-class html VariantExperiment-package html loadVariantExperiment html makeVariantExperimentFromGDS html makeVariantExperimentFromVCF html saveVariantExperiment html showAvailable html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'VariantExperiment' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'VariantExperiment' as VariantExperiment_1.8.0.zip * DONE (VariantExperiment) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'VariantExperiment' successfully unpacked and MD5 sums checked