############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/UMI4Cats_1.4.0.tar.gz && rm -rf UMI4Cats.buildbin-libdir && mkdir UMI4Cats.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=UMI4Cats.buildbin-libdir UMI4Cats_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL UMI4Cats_1.4.0.zip && rm UMI4Cats_1.4.0.tar.gz UMI4Cats_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 2320k 100 2320k 0 0 2802k 0 --:--:-- --:--:-- --:--:-- 2805k install for i386 * installing *source* package 'UMI4Cats' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'UMI4Cats' finding HTML links ... done UMI4C-methods html finding level-2 HTML links ... done UMI4C html UMI4C2dds html UMI4Cats html addGrouping html addStepping html alignmentUMI4C html calculateAdaptativeTrend html calculateDomainogram html callInteractions html combineUMI4C html contactsUMI4C html counterUMI4C html createGeneAnnotation html createStatsTable html darken html dds2UMI4C html demultiplexFastq html differentialNbinomWaldTestUMI4C html digestGenome html dot-getCache html dot-getSummaryBam html dot-singleAlignmentUMI4C html dot-singleCounterUMI4C html dot-singlePrepUMI4C html dot-singleSplitUMI4C html dot-smoothMonotone html downloadUMI4CexampleData html ex_ciita_umi4c html fisherUMI4C html formatPlotsUMI4C html geoMeanCoordinates html getColors html getFactors html getNormalizationMatrix html getSignInteractions html getViewpointCoordinates html groupSamplesUMI4C html makeWindowFragments html nbinomWaldTestUMI4C html pipe html plotDifferential html plotDomainogram html plotGenes html plotInteractions html plotInteractionsUMI4C html plotTrend html plotUMI4C html prepUMI4C html smoothMonotoneUMI4C html splitUMI4C html statsUMI4C html theme html themeXYblank html themeXblank html themeYblank html vstUMI4C html waldUMI4C html zscoreUMI4C html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'UMI4Cats' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'UMI4Cats' as UMI4Cats_1.4.0.zip * DONE (UMI4Cats) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'UMI4Cats' successfully unpacked and MD5 sums checked