############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TrajectoryGeometry_1.2.0.tar.gz && rm -rf TrajectoryGeometry.buildbin-libdir && mkdir TrajectoryGeometry.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TrajectoryGeometry.buildbin-libdir TrajectoryGeometry_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TrajectoryGeometry_1.2.0.zip && rm TrajectoryGeometry_1.2.0.tar.gz TrajectoryGeometry_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 4 1424k 4 61887 0 0 305k 0 0:00:04 --:--:-- 0:00:04 305k 73 1424k 73 1050k 0 0 875k 0 0:00:01 0:00:01 --:--:-- 875k 100 1424k 100 1424k 0 0 1000k 0 0:00:01 0:00:01 --:--:-- 999k install for i386 * installing *source* package 'TrajectoryGeometry' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TrajectoryGeometry' finding HTML links ... done analyseBranchPoint html analyseSingleCellTrajectory html chol_answers html chol_attributes html chol_branch_point_results html chol_pseudo_time html chol_pseudo_time_normalised html circleOnTheUnitSphere html crooked_path html crooked_path_center html crooked_path_projection html crooked_path_radius html distanceBetweenTrajectories html findSphereClusterCenter html findSphericalDistance html generateRandomPaths html generateRandomUnitVector html getDistanceDataForPaths html getSphericalData html getStepLengths html hep_answers html hep_attributes html hep_pseudo_time html hep_pseudo_time_normalised html orthonormalBasis html oscillation html pathProgression html pathToSphericalData html plotPathProjectionCenterAndCircle html projectPathToSphere html samplePath html single_cell_matrix html straight_path html straight_path_center html straight_path_projection html straight_path_radius html testPathForDirectionality html visualiseBranchPointStats html visualiseTrajectoryStats html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TrajectoryGeometry' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TrajectoryGeometry' as TrajectoryGeometry_1.2.0.zip * DONE (TrajectoryGeometry) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'TrajectoryGeometry' successfully unpacked and MD5 sums checked