############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL TileDBArray ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘TileDBArray’ ... ** using staged installation ** libs g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -c remap_indices.cpp -o remap_indices.o g++ -std=gnu++14 -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o TileDBArray.so RcppExports.o remap_indices.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-TileDBArray/00new/TileDBArray/libs ** R ** byte-compile and prepare package for lazy loading Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --cflags' had status 1 Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --libs' had status 1 ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --cflags' had status 1 Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --libs' had status 1 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --cflags' had status 1 Package tiledb was not found in the pkg-config search path. Perhaps you should add the directory containing `tiledb.pc' to the PKG_CONFIG_PATH environment variable No package 'tiledb' found Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) : running command ''/usr/bin/pkg-config' tiledb --libs' had status 1 ** testing if installed package keeps a record of temporary installation path * DONE (TileDBArray)