############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TNBC.CMS_1.10.0.tar.gz && rm -rf TNBC.CMS.buildbin-libdir && mkdir TNBC.CMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TNBC.CMS.buildbin-libdir TNBC.CMS_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TNBC.CMS_1.10.0.zip && rm TNBC.CMS_1.10.0.tar.gz TNBC.CMS_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 3 2726k 3 104k 0 0 481k 0 0:00:05 --:--:-- 0:00:05 481k 54 2726k 54 1485k 0 0 1206k 0 0:00:02 0:00:01 0:00:01 1206k 100 2726k 100 2726k 0 0 1522k 0 0:00:01 0:00:01 --:--:-- 1523k install for i386 * installing *source* package 'TNBC.CMS' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TNBC.CMS' finding HTML links ... done GSE25055 html computeDS html computeESTIMATEscore html computeGES html computexCellScore html performGSVA html plotHR html plotKM html predictCMS html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TNBC.CMS' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TNBC.CMS' as TNBC.CMS_1.10.0.zip * DONE (TNBC.CMS) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'TNBC.CMS' successfully unpacked and MD5 sums checked