############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf TBSignatureProfiler.buildbin-libdir && mkdir TBSignatureProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TBSignatureProfiler.buildbin-libdir TBSignatureProfiler_1.6.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'TBSignatureProfiler' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TBSignatureProfiler' finding HTML links ... done Bootstrap_LOOCV_LR_AUC html COVIDsignatures html LOOAUC_simple_multiple_noplot_one_df html ObtainSampleScore_OriginalModel html OriginalTrainingData html SignatureQuantitative html SulimanOriginalModel html TBSPapp html TB_hiv html TB_indian html TBcommon html TBsignatures html TBsignaturesSplit html addTBsignature html bootstrapAUC html common_sigAnnotData html compareAlgs html compareBoxplots html cv_glmnet_OriginalModel html deseq2_norm_rle html distinctColors html dot-OriginalModel_NoRetraining html dot-OriginalModel_Retraining html evaluateOriginalModel html knn_OriginalModel html lda_OriginalModel html mkAssay html plotQuantitative html randomForest_OriginalModel html ref_combat_impute html runTBsigProfiler html sigAnnotData html signatureBoxplot html signatureGeneHeatmap html signatureHeatmap html signatureROCplot html signatureROCplot_CI html subsetGeneSet html svm_OriginalModel html tableAUC html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TBSignatureProfiler' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TBSignatureProfiler' as TBSignatureProfiler_1.6.0.zip * DONE (TBSignatureProfiler)