############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SparseSignatures_2.4.0.tar.gz && rm -rf SparseSignatures.buildbin-libdir && mkdir SparseSignatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SparseSignatures.buildbin-libdir SparseSignatures_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SparseSignatures_2.4.0.zip && rm SparseSignatures_2.4.0.tar.gz SparseSignatures_2.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 790k 100 790k 0 0 1011k 0 --:--:-- --:--:-- --:--:-- 1012k install for i386 * installing *source* package 'SparseSignatures' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SparseSignatures' finding HTML links ... done background html background2 html cv_example html import.trinucleotides.counts html imported_data html lambdaRangeAlphaEvaluation html lambdaRangeBetaEvaluation html lambda_range_example html mutation_categories html nmfLasso html nmfLassoBootstrap html nmfLassoCV html nmf_LassoK_example html patients html patients.plot html sigAssignmentCV html sigAssignmentEvaluation html sigAssignmentLasso html signatures.plot html ssm560_reduced html startingBetaEstimation html starting_betas_example html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SparseSignatures' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SparseSignatures' as SparseSignatures_2.4.0.zip * DONE (SparseSignatures) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'SparseSignatures' successfully unpacked and MD5 sums checked