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This page was generated on 2022-01-19 13:07:26 -0500 (Wed, 19 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SPsimSeq on tokay2


To the developers/maintainers of the SPsimSeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SPsimSeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1869/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SPsimSeq 1.4.0  (landing page)
Joris Meys
Snapshot Date: 2022-01-18 01:55:07 -0500 (Tue, 18 Jan 2022)
git_url: https://git.bioconductor.org/packages/SPsimSeq
git_branch: RELEASE_3_14
git_last_commit: abaa3d8
git_last_commit_date: 2021-10-26 13:00:21 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SPsimSeq
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SPsimSeq_1.4.0.tar.gz && rm -rf SPsimSeq.buildbin-libdir && mkdir SPsimSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SPsimSeq.buildbin-libdir SPsimSeq_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SPsimSeq_1.4.0.zip && rm SPsimSeq_1.4.0.tar.gz SPsimSeq_1.4.0.zip
StartedAt: 2022-01-18 05:35:00 -0500 (Tue, 18 Jan 2022)
EndedAt: 2022-01-18 05:36:40 -0500 (Tue, 18 Jan 2022)
EllapsedTime: 100.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SPsimSeq_1.4.0.tar.gz && rm -rf SPsimSeq.buildbin-libdir && mkdir SPsimSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SPsimSeq.buildbin-libdir SPsimSeq_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SPsimSeq_1.4.0.zip && rm SPsimSeq_1.4.0.tar.gz SPsimSeq_1.4.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  267k  100  267k    0     0  1447k      0 --:--:-- --:--:-- --:--:-- 1455k

install for i386

* installing *source* package 'SPsimSeq' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SPsimSeq'
    finding HTML links ... done
    SPsimPerGene                            html  
    SPsimSeq-package                        html  
    SPsimSeq                                html  
    buildXmat                               html  
    calculateCPM                            html  
    checkInputValidity                      html  
    chooseCandGenes                         html  
    configExperiment                        html  
    constructDens                           html  
    estLibSizeDistr                         html  
    evaluateDensities                       html  
    expit                                   html  
    extractMat                              html  
    fitLLmodel                              html  
    fitPoisGlm                              html  
    fracZeroLogitModel                      html  
    genCopula                               html  
    genLibSizes                             html  
    geneParmEst                             html  
    matchCopula                             html  
    obtCorMatsBatch                         html  
    obtCount                                html  
    parmEstDensVec                          html  
    prepareSPsimOutputs                     html  
    samZeroID                               html  
    scNGP.data                              html  
    selectGenes                             html  
    zeroProbModel                           html  
    zhang.data.sub                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SPsimSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SPsimSeq' as SPsimSeq_1.4.0.zip
* DONE (SPsimSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SPsimSeq' successfully unpacked and MD5 sums checked