##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SNPhood_1.24.0.tar.gz && rm -rf SNPhood.buildbin-libdir && mkdir SNPhood.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SNPhood.buildbin-libdir SNPhood_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SNPhood_1.24.0.zip && rm SNPhood_1.24.0.tar.gz SNPhood_1.24.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 56 3962k   56 2242k    0     0  2227k      0  0:00:01  0:00:01 --:--:-- 2226k
100 3962k  100 3962k    0     0  2594k      0  0:00:01  0:00:01 --:--:-- 2595k

install for i386

* installing *source* package 'SNPhood' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SNPhood'
    finding HTML links ... done
    SNPhood-class                           html  
    SNPhood                                 html  
    SNPhood.o                               html  
    analyzeSNPhood                          html  
    finding level-2 HTML links ... done

    annotation-methods                      html  
    annotationBins                          html  
    annotationBins2                         html  
    annotationDatasets                      html  
    annotationReadGroups                    html  
    annotationRegions                       html  
    associateGenotypes                      html  
    bins-methods                            html  
    changeObjectIntegrityChecking           html  
    collectFiles                            html  
    convertToAllelicFractions               html  
    counts-method                           html  
    datasets-methods                        html  
    deleteDatasets                          html  
    deleteReadGroups                        html  
    deleteRegions                           html  
    enrichment-methods                      html  
    getDefaultParameterList                 html  
    mergeReadGroups                         html  
    parameters-methods                      html  
    plotAllelicBiasResults                  html  
    plotAllelicBiasResultsOverview          html  
    plotAndCalculateCorrelationDatasets     html  
    plotAndCalculateWeakAndStrongGenotype   html  
    plotAndClusterMatrix                    html  
    plotAndSummarizeAllelicBiasTest         html  
    plotBinCounts                           html  
    plotClusterAverage                      html  
    plotFDRResults                          html  
    plotGenotypesPerCluster                 html  
    plotGenotypesPerSNP                     html  
    plotRegionCounts                        html  
    readGroups-methods                      html  
    regions-methods                         html  
    renameBins                              html  
    renameDatasets                          html  
    renameReadGroups                        html  
    renameRegions                           html  
    results                                 html  
    testForAllelicBiases                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SNPhood' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SNPhood' as SNPhood_1.24.0.zip
* DONE (SNPhood)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SNPhood' successfully unpacked and MD5 sums checked