############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf SNPhood.buildbin-libdir && mkdir SNPhood.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SNPhood.buildbin-libdir SNPhood_1.24.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'SNPhood' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SNPhood' finding HTML links ... done SNPhood-class html SNPhood html SNPhood.o html analyzeSNPhood html finding level-2 HTML links ... done annotation-methods html annotationBins html annotationBins2 html annotationDatasets html annotationReadGroups html annotationRegions html associateGenotypes html bins-methods html changeObjectIntegrityChecking html collectFiles html convertToAllelicFractions html counts-method html datasets-methods html deleteDatasets html deleteReadGroups html deleteRegions html enrichment-methods html getDefaultParameterList html mergeReadGroups html parameters-methods html plotAllelicBiasResults html plotAllelicBiasResultsOverview html plotAndCalculateCorrelationDatasets html plotAndCalculateWeakAndStrongGenotype html plotAndClusterMatrix html plotAndSummarizeAllelicBiasTest html plotBinCounts html plotClusterAverage html plotFDRResults html plotGenotypesPerCluster html plotGenotypesPerSNP html plotRegionCounts html readGroups-methods html regions-methods html renameBins html renameDatasets html renameReadGroups html renameRegions html results html testForAllelicBiases html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SNPhood' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SNPhood' as SNPhood_1.24.0.zip * DONE (SNPhood)