Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:22 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SIMAT on tokay2


To the developers/maintainers of the SIMAT package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SIMAT.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1797/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SIMAT 1.26.0  (landing page)
M. R. Nezami Ranjbar
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/SIMAT
git_branch: RELEASE_3_14
git_last_commit: 03f478f
git_last_commit_date: 2021-10-26 12:19:16 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SIMAT
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SIMAT_1.26.0.tar.gz && rm -rf SIMAT.buildbin-libdir && mkdir SIMAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMAT.buildbin-libdir SIMAT_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SIMAT_1.26.0.zip && rm SIMAT_1.26.0.tar.gz SIMAT_1.26.0.zip
StartedAt: 2022-04-12 05:01:01 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:02:32 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 91.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SIMAT_1.26.0.tar.gz && rm -rf SIMAT.buildbin-libdir && mkdir SIMAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMAT.buildbin-libdir SIMAT_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SIMAT_1.26.0.zip && rm SIMAT_1.26.0.tar.gz SIMAT_1.26.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  925k  100  925k    0     0  1127k      0 --:--:-- --:--:-- --:--:-- 1128k

install for i386

* installing *source* package 'SIMAT' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SIMAT'
    finding HTML links ... done
    Library                                 html  
    RItable                                 html  
    Run                                     html  
    SIMAT-package                           html  
    Targets                                 html  
    getEIC                                  html  
    getPeak                                 html  
    getPeakScore                            html  
    getRI                                   html  
    getRIStandard                           html  
    getScore                                html  
    getTarget                               html  
    getTargetTable                          html  
    optFrag                                 html  
    plotEIC                                 html  
    plotTIC                                 html  
    putTargetTable                          html  
    readCDF                                 html  
    readMSL                                 html  
    target.table                            html  
    writeMSL                                html  
    writeResult                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SIMAT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIMAT' as SIMAT_1.26.0.zip
* DONE (SIMAT)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SIMAT' successfully unpacked and MD5 sums checked