############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RiboProfiling_1.24.0.tar.gz && rm -rf RiboProfiling.buildbin-libdir && mkdir RiboProfiling.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RiboProfiling.buildbin-libdir RiboProfiling_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RiboProfiling_1.24.0.zip && rm RiboProfiling_1.24.0.tar.gz RiboProfiling_1.24.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 9 4319k 9 409k 0 0 1089k 0 0:00:03 --:--:-- 0:00:03 1089k 60 4319k 60 2622k 0 0 1904k 0 0:00:02 0:00:01 0:00:01 1904k 100 4319k 100 4319k 0 0 2230k 0 0:00:01 0:00:01 --:--:-- 2230k install for i386 * installing *source* package 'RiboProfiling' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'BiocGenerics::Position' by 'ggplot2::Position' when loading 'RiboProfiling' ** help *** installing help indices converting help for package 'RiboProfiling' finding HTML links ... done RiboProfiling html aroundPromoter html cdsPosTransc html codonDataCtrl html codonIndexCovCtrl html codonInfo html codonPCA html countShiftReads html countsPlot html ctrlGAlignments html histMatchLength html orfRelativePos html plotSummarizedCov html printPCA html readStartCov html readsToStartOrEnd html riboSeqFromBAM html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'BiocGenerics::Position' by 'ggplot2::Position' when loading 'RiboProfiling' ** testing if installed package can be loaded from final location Warning: replacing previous import 'BiocGenerics::Position' by 'ggplot2::Position' when loading 'RiboProfiling' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RiboProfiling' ... ** testing if installed package can be loaded Warning: replacing previous import 'BiocGenerics::Position' by 'ggplot2::Position' when loading 'RiboProfiling' * MD5 sums packaged installation of 'RiboProfiling' as RiboProfiling_1.24.0.zip * DONE (RiboProfiling) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'RiboProfiling' successfully unpacked and MD5 sums checked