############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RiboDiPA_1.2.0.tar.gz && rm -rf RiboDiPA.buildbin-libdir && mkdir RiboDiPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RiboDiPA.buildbin-libdir RiboDiPA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RiboDiPA_1.2.0.zip && rm RiboDiPA_1.2.0.tar.gz RiboDiPA_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 69 245k 69 169k 0 0 501k 0 --:--:-- --:--:-- --:--:-- 501k 100 245k 100 245k 0 0 352k 0 --:--:-- --:--:-- --:--:-- 352k install for i386 * installing *source* package 'RiboDiPA' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c centerCPP.cpp -o centerCPP.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RiboDiPA.dll tmp.def RcppExports.o centerCPP.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RiboDiPA.buildbin-libdir/00LOCK-RiboDiPA/00new/RiboDiPA/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RiboDiPA' finding HTML links ... done DataBinning html PsiteMapping html RiboDiPA html data.binned html data.psite html diffPatternTest html diffPatternTestExon html normFactor html plotTest html plotTrack html psitecal html result.pst html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RiboDiPA' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c centerCPP.cpp -o centerCPP.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RiboDiPA.dll tmp.def RcppExports.o centerCPP.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RiboDiPA.buildbin-libdir/RiboDiPA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'RiboDiPA' as RiboDiPA_1.2.0.zip * DONE (RiboDiPA) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'RiboDiPA' successfully unpacked and MD5 sums checked