Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:12 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ReportingTools on tokay2


To the developers/maintainers of the ReportingTools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReportingTools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1579/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReportingTools 2.34.0  (landing page)
Jason A. Hackney , Gabriel Becker
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/ReportingTools
git_branch: RELEASE_3_14
git_last_commit: fb5aef0
git_last_commit_date: 2021-10-26 12:04:45 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ReportingTools
Version: 2.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ReportingTools_2.34.0.tar.gz && rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ReportingTools.buildbin-libdir ReportingTools_2.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.34.0.zip && rm ReportingTools_2.34.0.tar.gz ReportingTools_2.34.0.zip
StartedAt: 2022-04-12 07:15:09 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:17:01 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 112.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ReportingTools_2.34.0.tar.gz && rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ReportingTools.buildbin-libdir ReportingTools_2.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.34.0.zip && rm ReportingTools_2.34.0.tar.gz ReportingTools_2.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 1095k  100 1095k    0     0  1530k      0 --:--:-- --:--:-- --:--:-- 1530k

install for i386

* installing *source* package 'ReportingTools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'objectToHTML' with signature 'object="ggbio"': no definition for class "ggbio"
** help
*** installing help indices
  converting help for package 'ReportingTools'
    finding HTML links ... done
    BaseReportType-class                    html  
    CSVFile-class                           html  
    CSVFile                                 html  
    DataPackage-class                       html  
    DataPackage                             html  
    HTMLReport-class                        html  
    HTMLReport                              html  
    HTMLReportRef-class                     html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/ReportingTools.buildbin-libdir/00LOCK-ReportingTools/00new/ReportingTools/help/HTMLReport.html
    Link                                    html  
    ReportHandlers-class                    html  
    addReportColumns-methods                html  
    custHeaderPanel                         html  
    filename-methods                        html  
    finish-methods                          html  
    mockRnaSeqData                          html  
    objectToHTML-methods                    html  
    publish-methods                         html  
    finding level-2 HTML links ... done

    readReport                              html  
    reporting.theme                         html  
    reporting.theme.alternate               html  
    toReportDF-methods                      html  
    validConnection                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ReportingTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ReportingTools' as ReportingTools_2.34.0.zip
* DONE (ReportingTools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ReportingTools' successfully unpacked and MD5 sums checked