############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Rcpi.buildbin-libdir && mkdir Rcpi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=Rcpi.buildbin-libdir Rcpi_1.30.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'Rcpi' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Rcpi' finding HTML links ... done AA2DACOR html AA3DMoRSE html AAACF html AABLOSUM100 html AABLOSUM45 html AABLOSUM50 html AABLOSUM62 html AABLOSUM80 html AABurden html AACPSA html AAConn html AAConst html AADescAll html AAEdgeAdj html AAEigIdx html AAFGC html AAGETAWAY html AAGeom html AAInfo html AAMOE2D html AAMOE3D html AAMetaInfo html AAMolProp html AAPAM120 html AAPAM250 html AAPAM30 html AAPAM40 html AAPAM70 html AARDF html AARandic html AATopo html AATopoChg html AAWHIM html AAWalk html AAindex html OptAA3d html Rcpi-package html acc html calcDrugFPSim html calcDrugMCSSim html calcParProtGOSim html calcParProtSeqSim html calcTwoProtGOSim html calcTwoProtSeqSim html checkProt html convMolFormat html extractDrugAIO html extractDrugALOGP html extractDrugAminoAcidCount html extractDrugApol html extractDrugAromaticAtomsCount html extractDrugAromaticBondsCount html extractDrugAtomCount html extractDrugAutocorrelationCharge html extractDrugAutocorrelationMass html extractDrugAutocorrelationPolarizability html extractDrugBCUT html extractDrugBPol html extractDrugBondCount html extractDrugCPSA html extractDrugCarbonTypes html extractDrugChiChain html extractDrugChiCluster html extractDrugChiPath html extractDrugChiPathCluster html extractDrugDescOB html extractDrugECI html extractDrugEstate html extractDrugEstateComplete html extractDrugExtended html extractDrugExtendedComplete html extractDrugFMF html extractDrugFragmentComplexity html extractDrugGraph html extractDrugGraphComplete html extractDrugGravitationalIndex html extractDrugHBondAcceptorCount html extractDrugHBondDonorCount html extractDrugHybridization html extractDrugHybridizationComplete html extractDrugHybridizationRatio html extractDrugIPMolecularLearning html extractDrugKR html extractDrugKRComplete html extractDrugKappaShapeIndices html extractDrugKierHallSmarts html extractDrugLargestChain html extractDrugLargestPiSystem html extractDrugLengthOverBreadth html extractDrugLongestAliphaticChain html extractDrugMACCS html extractDrugMACCSComplete html extractDrugMDE html extractDrugMannholdLogP html extractDrugMomentOfInertia html extractDrugOBFP2 html extractDrugOBFP3 html extractDrugOBFP4 html extractDrugOBMACCS html extractDrugPetitjeanNumber html extractDrugPetitjeanShapeIndex html extractDrugPubChem html extractDrugPubChemComplete html extractDrugRotatableBondsCount html extractDrugRuleOfFive html extractDrugShortestPath html extractDrugShortestPathComplete html extractDrugStandard html extractDrugStandardComplete html extractDrugTPSA html extractDrugVABC html extractDrugVAdjMa html extractDrugWHIM html extractDrugWeight html extractDrugWeightedPath html extractDrugWienerNumbers html extractDrugXLogP html extractDrugZagrebIndex html extractPCMBLOSUM html extractPCMDescScales html extractPCMFAScales html extractPCMMDSScales html extractPCMPropScales html extractPCMScales html extractProtAAC html extractProtAPAAC html extractProtCTDC html extractProtCTDD html extractProtCTDT html extractProtCTriad html extractProtDC html extractProtGeary html extractProtMoran html extractProtMoreauBroto html extractProtPAAC html extractProtPSSM html extractProtPSSMAcc html extractProtPSSMFeature html extractProtQSO html extractProtSOCN html extractProtTC html getCPI html getDrug html getFASTAFromKEGG html getFASTAFromUniProt html getMolFromCAS html getMolFromChEMBL html getMolFromDrugBank html getMolFromKEGG html getMolFromPubChem html getPDBFromRCSBPDB html getPPI html getProt html getSeqFromKEGG html getSeqFromRCSBPDB html getSeqFromUniProt html getSmiFromChEMBL html getSmiFromDrugBank html getSmiFromKEGG html getSmiFromPubChem html readFASTA html readMolFromSDF html readMolFromSmi html readPDB html searchDrug html segProt html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'Rcpi' as Rcpi_1.30.0.zip * DONE (Rcpi)