Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-24 13:06:55 -0500 (Mon, 24 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for RTN on tokay2


To the developers/maintainers of the RTN package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RTN.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1670/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RTN 2.18.0  (landing page)
Mauro Castro
Snapshot Date: 2022-01-23 01:55:04 -0500 (Sun, 23 Jan 2022)
git_url: https://git.bioconductor.org/packages/RTN
git_branch: RELEASE_3_14
git_last_commit: cf102aa
git_last_commit_date: 2021-10-26 12:09:15 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RTN
Version: 2.18.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RTN_2.18.0.tar.gz && rm -rf RTN.buildbin-libdir && mkdir RTN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTN.buildbin-libdir RTN_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RTN_2.18.0.zip && rm RTN_2.18.0.tar.gz RTN_2.18.0.zip
StartedAt: 2022-01-23 07:30:04 -0500 (Sun, 23 Jan 2022)
EndedAt: 2022-01-23 07:32:47 -0500 (Sun, 23 Jan 2022)
EllapsedTime: 163.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RTN_2.18.0.tar.gz && rm -rf RTN.buildbin-libdir && mkdir RTN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTN.buildbin-libdir RTN_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RTN_2.18.0.zip && rm RTN_2.18.0.tar.gz RTN_2.18.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 27 9707k   27 2669k    0     0  5210k      0  0:00:01 --:--:--  0:00:01 5213k
100 9707k  100 9707k    0     0  7999k      0  0:00:01  0:00:01 --:--:-- 8009k

install for i386

* installing *source* package 'RTN' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RTN'
    finding HTML links ... done
    AVS-class                               html  
    RTN-package                             html  
    RTN.data                                html  
    TNA-class                               html  
    TNI-class                               html  
    TNI.data                                html  
    avs.evse                                html  
    avs.get                                 html  
    avs.pevse                               html  
    avs.plot1                               html  
    avs.plot2                               html  
    avs.rvse                                html  
    avs.vse                                 html  
    tna.get                                 html  
    tna.gsea1                               html  
    tna.gsea2                               html  
    tna.mra                                 html  
    tna.plot.gsea1                          html  
    tna.plot.gsea2                          html  
    tni.alpha.adjust                        html  
    tni.annotate.regulons                   html  
    tni.annotate.samples                    html  
    tni.area3                               html  
    finding level-2 HTML links ... done

    tni.bootstrap                           html  
    tni.conditional                         html  
    tni.constructor                         html  
    tni.dpi.filter                          html  
    tni.get                                 html  
    tni.graph                               html  
    tni.gsea2                               html  
    tni.overlap.genesets                    html  
    tni.permutation                         html  
    tni.plot.checks                         html  
    tni.plot.sre                            html  
    tni.preprocess                          html  
    tni.prune                               html  
    tni.regulon.summary                     html  
    tni.replace.samples                     html  
    tni.sre                                 html  
    tni2tna.preprocess                      html  
    upgradeTNA                              html  
    upgradeTNI                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RTN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RTN' as RTN_2.18.0.zip
* DONE (RTN)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RTN' successfully unpacked and MD5 sums checked