############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf RTCGAToolbox.buildbin-libdir && mkdir RTCGAToolbox.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTCGAToolbox.buildbin-libdir RTCGAToolbox_2.24.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'RTCGAToolbox' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RTCGAToolbox' finding HTML links ... done CorResult-class html DGEResult-class html FirehoseCGHArray-class html FirehoseData-class html FirehoseGISTIC-class html FirehoseMethylationArray-class html FirehosemRNAArray-class html RTCGAToolbox html accmini html biocExtract html finding level-2 HTML links ... done getBroadSubtypes html getCNGECorrelation html getData html getDiffExpressedGenes html getFirehoseAnalyzeDates html getFirehoseData html getFirehoseDatasets html getFirehoseRunningDates html getGISTICPeaks html getLinks html getMutationRate html getReport html getSurvival html hg19.ucsc.gene.locations html makeSummarizedExperimentFromGISTIC html selectType html showResults-CorResult html showResults-DGEResult html showResults html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RTCGAToolbox' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'RTCGAToolbox' as RTCGAToolbox_2.24.0.zip * DONE (RTCGAToolbox)