############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RImmPort_1.22.0.tar.gz && rm -rf RImmPort.buildbin-libdir && mkdir RImmPort.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RImmPort.buildbin-libdir RImmPort_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RImmPort_1.22.0.zip && rm RImmPort_1.22.0.tar.gz RImmPort_1.22.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 19 1912k 19 371k 0 0 551k 0 0:00:03 --:--:-- 0:00:03 551k 89 1912k 89 1714k 0 0 1012k 0 0:00:01 0:00:01 --:--:-- 1011k 100 1912k 100 1912k 0 0 1059k 0 0:00:01 0:00:01 --:--:-- 1059k install for i386 * installing *source* package 'RImmPort' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RImmPort' finding HTML links ... done AE html APMH html Adverse-Events-Domain html Associated-Persons-Medical-History-Domain html CM html Cellular-Quantification-Domain html Concomitant-Medications-Domain html DM html DV html Demographics-Domain html EX html Events-class html Exposure-Domain html FA html Findings-About-Domain html Findings-class html Genetics-Findings-Domain html Interventions-class html LB html Laboratory-Test-Results-Domain html MH html Medical-History-Domain html Nucleic-Acid-Quantification-Domain html PE html PF html Physical-Examination-Domain html Protein-Quantification-Domain html Protocol-Deviations-Domain html QS html Questionnaires-Domain html RImmPort html SR html SU html SUPP html SUPPDV html SUPPFA html SUPPLB html SUPPMH html SUPPPE html SUPPPF html SUPPVS html SUPPZA html SUPPZB html SUPPZC html SUPPZD html SV html Skin-Response-Domain html SpecialPurpose-class html Study-class html Subject-Visits-Domain html Substance-Use-Domain html TA html TI html TS html TV html Titer-Assay-Results-Domain html Trial-Arms-Domain html Trial-Inclusion-Exclusion-Criteria-Domain html Trial-Summary-Domain html Trial-Visits-Domain html TrialDesign-class html VS html Vital-Signs-Domain html ZA html ZB html ZC html ZD html buildNewSqliteDb html getAssayDataOfStudies html getDomainCode html getDomainDataOfStudies html getListOfAssayTypes html getListOfDomains html getListOfStudies html getStudiesWithSpecificAssayData html getStudiesWithSpecificDomainData html getStudy html loadSerializedStudyData html mergeDomainAndSupplemental html serialzeStudyData html setImmPortDataSource html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RImmPort' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'RImmPort' as RImmPort_1.22.0.zip * DONE (RImmPort) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'RImmPort' successfully unpacked and MD5 sums checked